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Plant Bioinformatics Methods and Protocols 2nd Edition by David Edwards 1493931660 9781493931668

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Plant Bioinformatics Methods and Protocols 2nd Edition David Edwards (Ed.) Digital Instant Download

Author(s): David Edwards (ed.)
ISBN(s): 9781493931668, 1493931660
Edition: 2
File Details: PDF, 16.25 MB
Year: 2015
Language: english
SKU: EB-5228038 Category: Tag:

Plant Bioinformatics Methods and Protocols 2nd Edition by David Edwards – Ebook PDF Instant Download/Delivery: 1493931660, 9781493931668

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Product details:

ISBN 10: 1493931660 

ISBN 13: 9781493931668

Author: David Edwards

The second edition of this volume focuses on applied bioinformatics with specific applications to crops and model plants. Plant Bioinformatics: Methods and Protocols is aimed at plant biologists who have an interest in, or requirement for, accessing and manipulating huge amounts of data being generated by high throughput technologies. This book would also be of interest to bioinformaticians and computer scientists who would benefit from an introduction to the different tools and systems available for plant research. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and software, step-by-step, readily reproducible protocols, and tips on troubleshooting and avoiding known pitfalls.

Authoritative and thorough, Plant Bioinformatics: Methods and Protocols helps researchers with the increasing volume and diversity of data from different plants and also the integration of multiple diverse forms of data.

Plant Bioinformatics Methods and Protocols 2nd Table of contents:

Using GenBank
UniProtKB/Swiss-Prot: The Manually Annotated Section of the UniProt KnowledgeBase and How to Use the Entry View
KEGG Bioinformatics Resource for Plant Genomics and Metabolomics
Plant Pathway Databases
The Plant Ontology: A Tool for Plant Genomics
Ensembl Plants: Integrating Tools for Visualizing, Mining, and Analyzing Plant Genomics Data
Gramene: A Resource for Comparative Analysis of Plant Genomes and Pathways
PGSB/MIPS Plant Genome Information Resources and Concepts for the Analysis of Complex Grass Genomes
MaizeGDB: The Maize Genetics and Genomics Database
WheatGenome.info: A Resource for Wheat Genomics
User Guidelines for the Brassica Database (BRAD)
TAG Sequence Identification of Genomic Regions Using TAGdb
Short Read Alignment Using SOAP2
Tablet: Visualizing Next-Generation Sequence Assemblies and Mappings
Analysis of Genotyping-by-Sequencing (GBS) Data
Skim-Based Genotyping by Sequencing Using a Double Haploid Population to Call SNPs, Infer Gene Conversions, and Improve Genome Assemblies
Finding and Characterizing Repeats in Plant Genomes
Analysis of RNA-Seq Data Using TopHat and Cufflinks

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Tags: David Edwards, Bioinformatics, Plant, Methods